PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_30905g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family AP2
Protein Properties Length: 420aa    MW: 46881.7 Da    PI: 5.4795
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_30905g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.54.6e-1565124155
            AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                    s y+GV++++++gr++A+++d  s+n    k+ ++++lg +  +e Aa a++ a++k++g
  MA_30905g0010  65 SIYRGVTRHRSTGRYEAHLWDkSSWNEtkhKKgRQVYLGAYNDEETAAHAYDLAALKYWG 124
                    57*******************777777777557*************************98 PP

2AP252.71.1e-16167218155
            AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t+eeAa+a++ a+ +++g
  MA_30905g0010 167 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYNTEEEAAAAYDMAAVEYRG 218
                    89****99**********99966...3.6*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.9E-1165124IPR001471AP2/ERF domain
SuperFamilySSF541712.68E-1565133IPR016177DNA-binding domain
CDDcd000188.28E-1965132No hitNo description
PROSITE profilePS5103218.86166132IPR001471AP2/ERF domain
SMARTSM003802.2E-2366138IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.1E-1666133IPR001471AP2/ERF domain
PfamPF008471.1E-11167218IPR001471AP2/ERF domain
SuperFamilySSF541715.1E-18167228IPR016177DNA-binding domain
CDDcd000181.26E-12167228No hitNo description
SMARTSM003805.3E-24168232IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-17168227IPR001471AP2/ERF domain
PROSITE profilePS5103218.479168226IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006110Biological Processregulation of glycolytic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009744Biological Processresponse to sucrose
GO:0019432Biological Processtriglyceride biosynthetic process
GO:1901959Biological Processpositive regulation of cutin biosynthetic process
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    Send to blast
MGCHVQILVA GENNNLKAGE ESSASLKSEA AAKNGSSLSQ PKTKRARKSL PKEKPVDSNA  60
ARRSSIYRGV TRHRSTGRYE AHLWDKSSWN ETKHKKGRQV YLGAYNDEET AAHAYDLAAL  120
KYWGSETTLN FPSNTYSKEL EAMQGISKEE YLASLRRRSS GFSRGVSKYR GVARHHHNGR  180
WEARIGRVFG NKYLYLGTYN TEEEAAAAYD MAAVEYRGLN AVTNFDLSRY AAYLRPGQNG  240
FSVEQSEFSS KAPEIEKSCI SQGSYQSHHD ETCELSDRIP QSASASTALE LLFQSAKFKE  300
MLERSKSDSG LIQPEQSKSL EEKHESISYS DDMMDAFFEN SDLLINVEEG QDITQFLESS  360
SCDNADIFHG VEADMEIQIS GLGICSSELD LDQQDYDLMH NPCMQSIDSI ALPCVISSYS
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1119960.0BT111996.1 Picea glauca clone GQ03308_J05 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011020562.11e-119PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060 isoform X1
SwissprotQ6X5Y61e-98WRI1_ARATH; Ethylene-responsive transcription factor WRI1
TrEMBLA0A0D2Q6I21e-116A0A0D2Q6I2_G
STRINGPOPTR_0003s18350.11e-111(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP11217209
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.37e-84AP2 family protein